MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Microbacterium paludicola
19428wA4_P1012
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 127
bases: 3,293,562 bps
CDS: 3,068
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 52
misc RNA:
Total features: 3,124
Total number of protein coding genes annotated/found:
3,068
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5044|JADGLL010000010.1
SEQF5044_00022
Genome Viewer
NA
AA
636/212
18326-18961
dCTP deaminase%2C dUMP-forming
SEQF5044|JADGLL010000010.1
SEQF5044_00023
Genome Viewer
NA
AA
726/242
19281-20006
Phosphonoacetaldehyde hydrolase
SEQF5044|JADGLL010000010.1
SEQF5044_00024
Genome Viewer
NA
AA
1173/391
20008-21180
Geraniol dehydrogenase
SEQF5044|JADGLL010000010.1
SEQF5044_00025
Genome Viewer
NA
AA
867/289
22108-21242
Glycerophosphodiester phosphodiesterase
SEQF5044|JADGLL010000010.1
SEQF5044_00026
Genome Viewer
NA
AA
369/123
22630-22262
hypothetical protein
SEQF5044|JADGLL010000010.1
SEQF5044_00027
Genome Viewer
NA
AA
2292/764
25179-22888
Immune inhibitor A
SEQF5044|JADGLL010000010.1
SEQF5044_00029
Genome Viewer
NA
AA
543/181
26075-26617
hypothetical protein
SEQF5044|JADGLL010000010.1
SEQF5044_00030
Genome Viewer
NA
AA
1215/405
26701-27915
Purine ribonucleoside efflux pump NepI
SEQF5044|JADGLL010000010.1
SEQF5044_00031
Genome Viewer
NA
AA
951/317
28869-27919
HTH-type transcriptional activator RhaR
SEQF5044|JADGLL010000010.1
SEQF5044_00032
Genome Viewer
NA
AA
1437/479
30367-28931
hypothetical protein
SEQF5044|JADGLL010000010.1
SEQF5044_00033
Genome Viewer
NA
AA
1860/620
30575-32434
Chaperone protein DnaK
SEQF5044|JADGLL010000010.1
SEQF5044_00034
Genome Viewer
NA
AA
696/232
32434-33129
Protein GrpE
SEQF5044|JADGLL010000010.1
SEQF5044_00035
Genome Viewer
NA
AA
981/327
33141-34121
Curved DNA-binding protein
SEQF5044|JADGLL010000010.1
SEQF5044_00036
Genome Viewer
NA
AA
456/152
34227-34682
hypothetical protein
SEQF5044|JADGLL010000010.1
SEQF5044_00037
Genome Viewer
NA
AA
2151/717
34679-36829
Glycogen operon protein GlgX
SEQF5044|JADGLL010000010.1
SEQF5044_00038
Genome Viewer
NA
AA
2571/857
40071-37501
Glycogen phosphorylase
SEQF5044|JADGLL010000010.1
SEQF5044_00039
Genome Viewer
NA
AA
1968/656
40194-42161
Alpha-1%2C4-glucan:maltose-1-phosphate maltosyltransferase 1
SEQF5044|JADGLL010000010.1
SEQF5044_00040
Genome Viewer
NA
AA
1761/587
42158-43918
Trehalose synthase/amylase TreS
SEQF5044|JADGLL010000010.1
SEQF5044_00041
Genome Viewer
NA
AA
1437/479
43915-45351
Maltokinase
SEQF5044|JADGLL010000010.1
SEQF5044_00042
Genome Viewer
NA
AA
2226/742
45351-47576
1%2C4-alpha-glucan branching enzyme GlgB
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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